Author Topic: origin  (Read 226 times)

gsgs

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Re: origin
« on: February 04, 2020, 03:10:48 am »
mutation pictures of coronaviruses,
409 selected viruses from genbank,Dec.2019, close to SARS/nCoV

the ~30000 nucleotides were divided into areas of 3000
so they fit on one page

using my old program designed for influenza (which has segments of <2300 nucleotides)

each black pixel is a nucleotide different from the average at that position
each line is a virus, each column is a position
positions without mutation are left out
rows and columns are re-sorted for maximum connected areas of black pixels

the average = orange rows are mainly human SARS-viruses
(I should remove them and run it again ...)


http://magictour.free.fr/oro5f.GIF
« Last Edit: February 04, 2020, 03:13:58 am by gsgs »